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Dynamic Crowding Regulates Transcription.
Biophys J. 2020 May 5;118(9):2117-2129. doi: 10.1016/j.bpj.2019.11.007. Epub 2019 Nov 15.
Biophys J. 2020.
PMID: 31818468
Free PMC article.
Chromatin as self-returning walks: From population to single cell and back.
Shim AR, Huang K, Backman V, Szleifer I.
Shim AR, et al.
Biophys Rep (N Y). 2021 Dec 10;2(1):100042. doi: 10.1016/j.bpr.2021.100042. eCollection 2022 Mar 9.
Biophys Rep (N Y). 2021.
PMID: 36425085
Free PMC article.
Review.
Item in Clipboard
Physical and data structure of 3D genome.
Huang K, Li Y, Shim AR, Virk RKA, Agrawal V, Eshein A, Nap RJ, Almassalha LM, Backman V, Szleifer I.
Huang K, et al. Among authors: shim ar.
Sci Adv. 2020 Jan 10;6(2):eaay4055. doi: 10.1126/sciadv.aay4055. eCollection 2020 Jan.
Sci Adv. 2020.
PMID: 31950084
Free PMC article.
Item in Clipboard
Detecting radio- and chemoresistant cells in 3D cancer co-cultures using chromatin biomarkers.
Pekeč T, Venkatachalapathy S, Shim AR, Paysan D, Grzmil M, Schibli R, Béhé M, Shivashankar GV.
Pekeč T, et al. Among authors: shim ar.
Sci Rep. 2023 Nov 24;13(1):20662. doi: 10.1038/s41598-023-47287-2.
Sci Rep. 2023.
PMID: 38001169
Free PMC article.
Item in Clipboard
Nanoscale chromatin imaging and analysis platform bridges 4D chromatin organization with molecular function.
Li Y, Eshein A, Virk RKA, Eid A, Wu W, Frederick J, VanDerway D, Gladstein S, Huang K, Shim AR, Anthony NM, Bauer GM, Zhou X, Agrawal V, Pujadas EM, Jain S, Esteve G, Chandler JE, Nguyen TQ, Bleher R, de Pablo JJ, Szleifer I, Dravid VP, Almassalha LM, Backman V.
Li Y, et al. Among authors: shim ar.
Sci Adv. 2021 Jan 1;7(1):eabe4310. doi: 10.1126/sciadv.abe4310. Print 2021 Jan.
Sci Adv. 2021.
PMID: 33523864
Free PMC article.
Item in Clipboard
Encapsulation of Nanoparticles During Polymer Micelle Formation: A Dissipative Particle Dynamics Study.
Hpone Myint K, Brown JR, Shim AR, Wyslouzil BE, Hall LM.
Hpone Myint K, et al. Among authors: shim ar.
J Phys Chem B. 2016 Nov 10;120(44):11582-11594. doi: 10.1021/acs.jpcb.6b07324. Epub 2016 Oct 27.
J Phys Chem B. 2016.
PMID: 27749067
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